mtDNA Mutation Summary

HVR1HVR2
Markers1
6
2
9
4
T
1
6
5
1
9
C
1
6
1
2
6
C
1
6
3
0
4
C
1
6
2
9
6
T
1
6
2
3
9
T
1
6
3
6
2
C
1
6
1
0
4
T
1
6
1
9
2
T
1
6
2
5
7
-
Unique
Mutations
(+16000)
7
3
G
3
1
5
.
1
C
2
6
3
G
3
0
9
.
1
C
1
5
2
C
1
9
5
C
3
0
9
.
2
C
5
2
2
-
5
2
3
-
1
5
1
T
1
4
6
C
2
2
8
A
3
2
1
C
4
5
8
T
Unique
Mutations
Freq(%)
Count
100.0
70
100.0
70
98.6
69
95.7
67
71.4
50
5.7
4
4.3
3
2.9
2
2.9
2
2.9
2
1.4
1
100.0
70
98.6
69
97.1
68
65.7
46
27.1
19
7.1
5
7.1
5
7.1
5
7.1
5
5.7
4
4.3
3
2.9
2
2.9
2
2.9
2
1.4
1
IDHG
10132T2b+++++     16092C+++           
107542T2b+++++     ++++   ++  +  
112552T2b+++++     16263Y++++ +        
112911T2b++++    + 16207G,
16274A
++++          
122043T2b++++      +++++         
124628T2b+++++     ++++   ++  +  
125060T2b++++      ++++ +        
127530T2b+++++     ++++         +
130641T2b++++      16172C++++          
134706T2b++++   +  +++++         
142489T2b+++++     +++           
143035T2b+++++     16189Y++            
146266T2b+++++     +++           
146930T2b+++++     +++++         
151341T2b+++++     ++++  +       207A,
338T
152045T2b++++++    + +           
153580T2b+++++     +++    ++     
154372T2b+++++     ++++ +      + 
154637T2b++++      16359C+++++         
156013T2b++++++    ++++  +       
159065T2b++++      +++++         
161091T2b+++++     16147T,
16179T,
16297C
++++          513A
16257T2b+++++     16275G+++++         
16273T2b+++++     +++           
17642T2b+++++     ++++          523.1C,
523.2A
19765T2b+++++     +++ ++        
21971T2b++++++    ++++          
23996T2b++++      16169T+++++         
28065T2b+++++     16218T,
16287T
++++      +  +
38423T2b++++      +++ +         
41647T2b+++       +++ +         
42065T2b+++++     16368C+++           
43924T2b+++++     ++++          
47329T2b++++      ++++          
56154T2b++++ +    +++++         
57866T2b++++      16296Y+++      +    
59836T2b+++++     ++++          
60365T2b+++++     16145A++++ +      + 
74059T2b+++++     +++           
75460T2b+++++     ++++  +  +    
7956T2b+++++     +++    ++     
81783T2b+++++     +++           
84537T2b+++++     ++ +          
85043T2b++++      16181G+++++         
86603T2b+++++     ++++          189G
86879T2b+++++     ++++          
97050T2b+++++ +   ++++          
E2174T2b++ ++     ++++          
E4791T2b+++++     +++ +         
N14628T2b+++++ +   ++++          
N17858T2b+++++     ++++     +    
N18407T2b+++++     +++++         
N19609T2b+++++     ++++          93G
N21282T2b+++++     16187T++++     +    
N23469T2b+++++ +   ++++          
N25457T2b+++++     +++           150T
N39827T2b++++      +++++         
N40864T2b++++      +++       +   41T,
319C
N44405T2b+++++    ++++ +         
N49536T2b+++++    ++++ +     +   
N56379T2b+++ +     +++           
N56756T2b+++++     ++++          
N58979T2b+++     + +++           
N61355T2b+++++     +++           
N61790T2b++++      16189C+++++         
N71233T2b+++++     ++++          
N72970T2b+++++     ++++   ++     
N78621T2b+++++     16051G++++  +       
N8772T2b++++   +  +++ +         
N9408T2b++++      ++++  +       
Notes:
  1. Red Markers indicate >50% of samples tested were positive for marker
  2. * Data Entries are omitted in Genetic Distance Calculations (No HVR2 Data)
  3. * Markers are ignored in Genetic Distance Calculations
  4. + in column indicates the samples tested positive for marker
  5. blank in column indicates the samples tested negative for marker
  6. N in column indicates the samples were not tested for marker and omitted from frequency calculations
  7. HG in Bold are not estimated


Genetic Distance Report

NameHG
10132T2b0546454345131353345446414335634223542514313532332333343245342241524444
107542T2b5057505456464466256557545646767534673645244643445444454558675374631575
112552T2b4506452345353355525446434335656423562334533532334333343447564263524464
112911T2b6760474545575577765648656755856643564756755554556555565647786445546664
122043T2b4544052321353155541406234331612421142534533132332331343405344243124422
124628T2b5057505456464466256557545646767534673645244643445444454558675374631575
125060T2b4524250323353355523426434333634421342334533332334333343425564243324442
127530T2b3435343034242244434335323424345312451423422421223222232336453152413353
130641T2b4544252303353355543426434533634421342534533332334333343425564243324442
134706T2b5655163430464266652517345442723532253645644243443442454516455354235513
142489T2b1435343234020242234335303224523112431403202421221222232134231130413333
143035T2b3657565456202464456557525446745334653625422643443444454356453352635555
146266T2b1435343234020242234335303224523112431403202421221222232134231130413333
146930T2b3435143232242044432315123222523312251423422221221220232316233152213333
151341T2b5657565456464406656357545646767534673643644643445444454558675374635373
152045T2b3657565456242460456357525426745334453625424643443444454356453352635555
153580T2b3257525456242464056557525446745334653625024643443444454356453352631555
154372T2b4526452345353355505446434335656423562134533532334333343447564263524464
154637T2b5655163432464266650517345442723532253645644243443442454516455354235533
156013T2b4546454345353333545046434515656423362532533532334333343447564263524262
159065T2b4544052321353155541406234331612421142534533132332331343405344243124422
161091T2b6768676567575577767660656757878645784756755754556555565669786485746686
16257T2b4546254343353155543426034333634423362534533332332331343427344263324444
16273T2b1435343234020242234335303224523112431403202421221222232134231130413333
17642T2b4546454345353355545446430535656423562534533532334333343447564263524464
19765T2b3637363454242264434537325044723334453425424443441442454336233352435535
21971T2b3435343234242242434135323404545312251423422421223222232336453152413353
23996T2b5655163432464266652517345440723532253645644243443442454516455354235533
28065T2b6768676367575577767668656757078645784756755754556555565667766485746686
38423T2b3655163432242264452517325242701332233625424243441442454314233332235513
41647T2b4766274543353375563628436353810443344736535354552553565425342423346624
42065T2b2546454345131353345446414335634023542514313532332333343245342241524444
43924T2b2324232123131133323224212313434201340312311310112111121225342041302242
47329T2b3433141212242244432315323422523310231423422221223222232314453132213331
56154T2b5655163432464264652317345422723532053645644243443442454516455354235533
57866T2b4766474545353575565648636555834443504734535554554535545445564443546644
59836T2b2324232123131133323224212313434201340312311310112111121225342041302242
60365T2b5637563456464466616557545446767534673045644643445444454558675374635575
74059T2b1435343234020242234335303224523112431403202421221222232134231130413333
75460T2b4546454345353335545246434535656423542530533532334313323447564263524262
7956T2b3257525456242464056557525446745334653625024643443444454356453352631555
81783T2b1435343234020242234335303224523112431403202421221222232134231130413333
84537T2b3435343234222244434335323424545312451423420421223222232336453152413353
85043T2b5655163432464266652517345442723532253645644043443442454516455354235533
86603T2b3435343234242244434335323424545312451423422401223222232336453152413353
86879T2b2324232123131133323224212313434201340312311310112111121225342041302242
97050T2b3435343234242244434335323424545312451423422421023022230336453152413353
E2174T2b3435343234242244434335323424545312451423422421203222232336453152413353
E4791T2b2546254343131153343426214133612223342514313332330331343225122241324424
N14628T2b3435343234242244434335323424545312451423422421023022230336453152413353
N17858T2b3435343234242244434335323424545312431421422421223202212336453152413353
N18407T2b3435143232242044432315123222523312251423422221221220232316233152213333
N19609T2b3435343234242244434335323424545312451423422421223222032336453152413353
N21282T2b4546454345353355545446434535656423542532533532334313303447564263524464
N23469T2b3435343234242244434335323424545312451423422421023022230336453152413353
N25457T2b2546454345131353345446414335634223542514313532332333343045342241524444
N39827T2b4544052321353155541406234331612421142534533132332331343405344243124422
N40864T2b5877585656464686676759747666745554655847646665665666676550655554657755
N44405T2b3657365454242264454537325244723334453625424443441442454336013352435535
N49536T2b4768476565353375565648436355634445564736535554552553565445104463546646
N56379T2b2546454345131353345446414335632223542514313532332333343245340221524444
N56756T2b2324232123131133323224212313434201340312311310112111121225342041302242
N58979T2b4764474545353575565648636555832443544736535554554555565445562403546644
N61355T2b1435343234020242234335303224523112431403202421221222232134231130413333
N61790T2b5655163432464266652517345442723532253645644243443442454516455354035533
N71233T2b2324232123131133323224212313434201340312311310112111121225342041302242
N72970T2b4146414345353355145446434535656423562534133532334333343447564263520464
N78621T2b4546454345353335545246434535656423562532533532334333343447564263524062
N8772T2b4766274541353375563628436353812443344736535354552553565425344443346604
N9408T2b4544252323353335543226434533634421342532533332334333343425564243324240
Genetic Distance 0 1 2 3 > 3
A lower number in a column indicates a closer match

Created with mtDNAtool version 0.65 BETA.