mtDNA Mutation Summary

HVR1HVR2
Markers1
6
2
9
4
T
1
6
5
1
9
C
1
6
1
2
6
C
1
6
3
0
4
C
1
6
2
9
6
T
1
6
2
3
9
T
1
6
3
6
2
C
1
6
1
0
4
T
1
6
1
9
2
T
Unique
Mutations
(+16000)
7
3
G
2
6
3
G
3
1
5
.
1
C
3
0
9
.
1
C
1
5
2
C
1
5
1
T
5
2
2
-
5
2
3
-
1
9
5
C
3
0
9
.
2
C
1
4
6
C
4
5
8
T
Unique
Mutations
Freq(%)
Count
100.0
53
100.0
53
98.1
52
94.3
50
64.2
34
5.7
3
5.7
3
3.8
2
3.8
2
1.9
1
100.0
53
100.0
53
98.1
52
67.9
36
32.1
17
7.5
4
7.5
4
7.5
4
5.7
3
5.7
3
3.8
2
3.8
2
1.9
1
IDHG
10132T2b +++++    16092C+++         
107542T2b +++++    ++++  ++    228A
112911T2b ++++    +16207G,
16274A
++++        
122043T2b ++++     +++++       
125060T2b ++++     ++++    +   
127530T2b +++++    ++++       +
130641T2b ++++     16172C++++        
134706T2b ++++   + +++++       
146266T2b +++++    +++         
146930T2b +++++    +++++       
152045T2b ++++++   ++          
153580T2b +++++    +++   ++    
154637T2b ++++     16359C+++++       
156013T2b ++++++   ++++     +  
159065T2b ++++     +++++       
161091T2b +++++    16147T,
16179T,
16297C
++++        513A
16257T2b +++++    16275G+++++       
17642T2b +++++    ++++        523.1C,
523.2A
19765T2b +++++    +++ +   +   
23996T2b ++++     16169T+++++       
28065T2b +++++    16218T,
16287T
++++      ++
41647T2b +++      +++ +       
42065T2b +++++    16368C+++         
43924T2b +++++    ++++        
47329T2b ++++     ++++        
56154T2b ++++ +   +++++       
57866T2b ++++     16296Y+++  +      
59836T2b +++++    ++++        
60365T2b +++++    16145A++++    +   321C
75460T2b +++++    ++++ +   +  
7956T2b +++++    +++   ++    
85043T2b ++++     16181G+++++       
86879T2b +++++    ++++        
97050T2b +++++ +  ++++        
E2174 T2b ++ ++    ++++        
E4791 T2b +++++    +++ +       
E6050 T2b ++++     +++++       
N14628 T2b +++++ +  ++++        
N17858 T2b +++++    ++++ +      
N18407 T2b +++++    +++++       
N19609 T2b +++++    ++++        93G
N21282 T2b +++++    16187T++++ +      
N23469 T2b +++++ +  ++++        
N25457 T2b +++++    +++         150T
N39827 T2b ++++     +++++       
N40864 T2b ++++     +++       + 41T,
319C
N44405 T2b +++++    16257-+++ +       
N56379 T2b +++ +    +++         
N58979 T2b +++     ++++         
N61355 T2b +++++    +++         
N72970 T2b +++++    ++++  ++    
N8772 T2b ++++   + +++ +       
N9408 T2b ++++     ++++     +  
Notes:
  1. Red Markers indicate >50% of samples tested were positive for marker
  2. * Data Entries are omitted in Genetic Distance Calculations (No HVR2 Data)
  3. * Markers are ignored in Genetic Distance Calculations
  4. + in column indicates the samples tested positive for marker
  5. blank in column indicates the samples tested negative for marker
  6. N in column indicates the samples were not tested for marker and omitted from frequency calculations
  7. HG in Bold are not estimated


Genetic Distance Report

NameHG
10132T2b 05644345133354464435642235425435233243333432453241444
107542T2b 50755456446265575566775346736526344554444545586574175
112911T2b 67044545557756486675866435647675455645555656477645664
122043T2b 45402321315514062431624211425451233203313434053443422
125060T2b 45420323335534264433644213423453233423333434255443442
127530T2b 34533034224443353344353124514344122332222323364352353
130641T2b 45422303335534264453644213425453233423333434255443442
134706T2b 56513430426625173542735322536562344314424545164554513
146266T2b 14533234022243353324531124314324122132222321342130333
146930T2b 34513232204423151322533122514342122112202323162352333
152045T2b 36755456240463575546753344536546344354444543564352555
153580T2b 32755456244065575546753346536506344354444543564352155
154637T2b 56513432426605173542735322536562344314424545164554533
156013T2b 45644345333550464455664233625255233443333434475463462
159065T2b 45402321315514062431624211425451233203313434053443422
161091T2b 67866567557776606677886457847677455665555656697685686
16257T2b 45624343315534260433644233625453233223313434273463444
17642T2b 45644345335554464055664235625455233443333434475463464
19765T2b 36733454224445373504733344534544344134424543362352535
23996T2b 56513432426625173540735322536562344314424545164554533
28065T2b 67866367557776686677086457847677455665555656677685686
41647T2b 47624543335536284633804433447653455225535654253223624
42065T2b 25644345133354464435640235425435233243333432453241444
43924T2b 23422123113332242233442013403233011221111212253241242
47329T2b 34311212224423153342533102314342122312222323144332331
56154T2b 56513432424623173542735320536562344314424545164554533
57866T2b 47644545355556486655844435047455455445355454455443644
59836T2b 23422123113332242233442013403233011221111212253241242
60365T2b 56753456446665575546775346730566344554444545586574575
75460T2b 45644345335552464455664235425055233443133234475463462
7956T2b 32755456244065575546753346536506344354444543564352155
85043T2b 56513432426625173542735322536560344314424545164554533
86879T2b 23422123113332242233442013403233011221111212253241242
97050T2b 34533234224443353344553124514344102330222303364352353
E2174 T2b 34533234224443353344553124514344120332222323364352353
E4791 T2b 25624343113334262413622233425433233023313432251241424
E6050 T2b 45402321315514062431624211425451233203313434053443422
N14628 T2b 34533234224443353344553124514344102330222303364352353
N17858 T2b 34533234224443353344553124314144122332022123364352353
N18407 T2b 34513232204423151322533122514342122112202323162352333
N19609 T2b 34533234224443353344553124514344122332220323364352353
N21282 T2b 45644345335554464455664235425255233443133034475463464
N23469 T2b 34533234224443353344553124514344102330222303364352353
N25457 T2b 25644345133354464435642235425435233243333430453241444
N39827 T2b 45402321315514062431624211425451233203313434053443422
N40864 T2b 58755656466667597766755546558766566556666765506554755
N44405 T2b 36735454224445373524733344536544344134424543360352535
N56379 T2b 25644345133354464435622235425435233243333432453021444
N58979 T2b 47444545355556486655824435447655455445555654455203644
N61355 T2b 14533234022243353324531124314324122132222321342130333
N72970 T2b 41644345335154464455664235625415233443333434475463064
N8772 T2b 47624541335536284633824433447653455225535654253443604
N9408 T2b 45422323335532264453644213425253233423333434255443440
Genetic Distance 0 1 2 3 > 3
A lower number in a column indicates a closer match

Created with mtDNAtool version 0.65 BETA.